 Dear All
I am trying to use combat to perform batch correction of RT-PCR data. In
particular I have around 40 genes and 59 samples.
The samples are divided in two categories (resistant on a particular
treatment and sensitive) and they come from different batch (6 samples + 19
samples + 24 samples).
To perform batch correction I used the default parameter. I was wondering
if it is possible use ComBat for this kind of analysis or if I have to try
with different tools.
If you need more details please do not hesitate to contact me.

Best

Giuliano Stirparo

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