Hi,

Thanks a lot. Turns out I was using an outdated version of Gviz without
that feature.

Best,
Martin


--
M.A. (Martin) Rijlaarsdam MSc. MD
Erasmus MC - University Medical Center Rotterdam
Department of Pathology
Room Be-432b
Shipping adress: P.O. Box 2040, 3000 CA Rotterdam, The Netherlands
Visiting adress: Dr. Molewaterplein 50, 3015 GE Rotterdam, The Netherlands

Email: m.a.rijlaarsdam@gmail.com
Mobile: +31 6 45408508
Telephone (work): +31 10 7033409
Fax +31 10 7044365
Website: http://www.martinrijlaarsdam.nl


On Mon, May 12, 2014 at 1:54 PM, Hahne, Florian
<florian.hahne@novartis.com>wrote:

> Hi Martin,
> You can control the rotation of the title text using the rotate.title
> parameter. Please note that this will not automatically adjust the width
> of the title panel, so you may want to decrease the font size, (cex.title)
> or increase the title panel width (title.width), or maybe both. I will
> have to re-work the while process of setting up the title panels for this
> to work automatically.
> With respect to the color bar: try the showColorBar and showSampleNames
> parameters, they should do exactly what you ask for.
> Florian
>
>
>
> On 01/05/14 11:33, "Martin Rijlaarsdam" <m.a.rijlaarsdam@gmail.com> wrote:
>
> >Dear Sirs,
> >
> >Thank you very much for Gviz!
> >
> >I have been using it for a while now but I have two issues that I cannot
> >seem to figure out.  Both are pretty trivial settings, so my apologies in
> >advance. Please see  the attached image as an example.
> >
> >1) I would like to rotate the text in the title panel for some of the
> >tracks (HMM, ALL, DHP) so that the text is horizontal.
> >2) I would like to remove the color bar and it's legend from the heatmap.
> >Ik can remove the color gradient, but the legend (20,40,60,80) remains
> >visible. I want to remove it because the current presentation suggests a
> >relation between the tumor types presented.
> >
> >Thanks in advance for any suggestions that you might have.
> >
> >Kind regards,
> >Martin
> >
> >--
> >M.A. (Martin) Rijlaarsdam MSc. MD
> >Erasmus MC - University Medical Center Rotterdam
> >Department of Pathology
> >Room Be-432b
> >Shipping adress: P.O. Box 2040, 3000 CA Rotterdam, The Netherlands
> >Visiting adress: Dr. Molewaterplein 50, 3015 GE Rotterdam, The Netherlands
> >
> >Email: m.a.rijlaarsdam@gmail.com
> >Mobile: +31 6 45408508
> >Telephone (work): +31 10 7033409
> >Fax +31 10 7044365
> >Website: http://www.martinrijlaarsdam.nl
>
>

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