Hello,


I would like to have expression data for GSE27597.  When I ran following
command line:



data1 = getGEO("GSE27597")



I noticed that there are two files related to this GSE (see below):





Found 2 file(s)


GSE27597-GPL13243_series_matrix.txt.gz

Using locally cached version:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GSE27597-GPL13243_series_matrix.txt.gz

Using locally cached version of GPL13243 found here:

C:\Users\AppData\Local\Temp\RtmpodgO6C/GPL13243.soft



GSE27597-GPL5175_series_matrix.txt.gz

Using locally cached version:
C:\Users\AppData\Local\Temp\RtmpodgO6C/GSE27597-GPL5175_series_matrix.txt.gz

Using locally cached version of GPL5175 found here:

C:\Users\AppData\Local\Temp\RtmpodgO6C/GPL5175.soft



When I ran following line



 datExpr = exprs (data1)



to get expression data I did not get the main data that includes more
samples, but I got the smaller dataset that has few samples.



May someone let me know how I could deal with this problem?



Thanks,

Jerry

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