Hi there,

I'm an amateur edgeR user, and I'm having trouble generating a heat map for
the differentially expressed genes. All examples that I've looked at
requires that I normalize the counts but I've already normalized them prior
to doing analysis in R. I'm running a glm with blocking and have generated
my topTags. From here, I'm not sure how to generate a heatmap. Could you
offer any advice or suggestions?

Best,
Eleanor Su

M.S. Candidate
Department of Biology
University of Nevada, Reno
Reno, Nevada 89577
775-742-4391

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