Hi All,

I'm new to R. I just installed the HTqPCR package and I'm trying to create a qPCRset object from 8 Fluidigm files. I got some help earlier to read in one file but now I need to read in the whole set. Also, when I read in the single file the sample names were listed as 1.file name, 2.file name etc. and I would like to know how to specify the correct names that are in the file. The previous command I used was:
>temp <- readCtData(files = "ALS_Plate1_Rep1_Results_1361960062.csv", path = "C:/Users/allairen/R/Fluidigm", n.features = 96 * 96, flag = 9, feature =5, type = 6, Ct =7, position= 1, skip=12, sep=",")

The files I would like to read in are:

ALS_Plate1_Rep1_Results_1361960062
ALS_Plate1_Rep2_Results_1361960064
ALS_Plate1_Rep3_Results_1361960066
ALS_Plate1_Rep4_Results_1361960068
ALS_Plate2_Rep1_Results_1361960063
ALS_Plate2_Rep2_Results_1361960065
ALS_Plate2_Rep3_Results_1361960067
ALS_Plate2_Rep4_Results_1361960069

Any help or suggestions would be greatly appreciated!

Thanks so much,

Norm


Norm Allaire
Scientist II
Genetics and Genomics
Biogen Idec
14 Cambridge Center
Cambridge, MA 02142
Office:  617-679-2932
e-mail:  norm.allaire@biogenidec.com<mailto:norm.allaire@biogenidec.com>

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