Dear All,

First, wish you all a very happy and prosporous New Year.

In EdgeR manual[Case Studies section], for two group comparison, generally
exactTest usage is shown, whereas for the multiple group comparison glm
based analysis has been shown. In 1.4 quick start section, use of glm based
analysis for two group comparison is mentioned with an additional use of
design matrix.

Now my question :- Is it ok to use glm based analysis for two group
comparison? I would appreciate any suggestion.


Kind Regards


-- 
Reema Singh
Postdoctoral Research Assistant
College of Life Sciences
University of Dundee,
Dundee DD1 4HN, Scotland
United Kingdom

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