Raquel,

My guess would be no. But you could do frma then convert to barcode
z-scores then apply combat. Or frma then binary barcode may work without
combat depending on the magnitude of the batch effects in your data.

Best,
Matt
On Nov 26, 2013 6:19 AM, "Martinez.Raquel" <rmartinezg@cnio.es> wrote:

> Dear all,
> I combine frma and combat to analyze gene expression data.
> Would be a good idea to use barcode method with the combat results?
>
> Thanks in advance
> Raquel
>
> **NOTA DE CONFIDENCIALIDAD** Este correo electrónico, y ...{{dropped:3}}
>
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
>

	[[alternative HTML version deleted]]

