Hi,

I notice in the DESeq vignette<http://bioconductor.org/packages/release/bioc/vignettes/DESeq/inst/doc/DESeq.pdf> there is a "Fixme" comment about including how to test specific comparisons using nbinomGLMTest (page 12). It would be great if someone with experience doing this could let me know how it is done.

Thanks in advance,
Jamie

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