Dear bioconducter mailing list

I am a PhD student in plant breeding department in Norway. I am using your
limma package for analyzing my RNA-seq data. Since I am not a statistician,
so I am asking you a very small question from you. I have a 2 factorial
experiment with a split plot design, where block was the main plot and lane
was in sub plot. Now I want to fit the block as fixed effect and lane as a
random effect. Could you please kindly tell me very briefly that how can I
define fixed and random effect together in limma package?
I read section 9.7 and 11.3 where it was described for microarray data but
dont know how to handel with voom function for RNAseq data.

Best wishes

Fabina
Oslo, Norway

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