Hi guys,
I would like to store lists of variants (SNPs and INDELs) in a convenient format to be used frequently with other bioconductor packages, and I was thinking to store them as Annotation databases.
In this way I could store and query my own list of variants with annotations coming from my work and/or previous experiments.

Most of the examples/vignettes I could find like SQLForge are however gene-centric.
Can I create a custom one, maybe using SNPlocs as template?

thanks for any suggestions,
Francesco



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