Silke,

This is a bug. I just fixed it in flowCore 1.26.2.

Thanks,

Mike

On 08/02/2013 03:00 AM, bioconductor-request@r-project.org wrote:
> Hi all,
>
> I have problems parsing a FlowJo Workspace when using a data file with more than one dataset.
> I get the following error message.
>
> Warning message:
> The file contains 1 additional data segment.
> The default is to read the first segment only.
> Please consider setting the 'dataset' argument.
>
> However, I want to use the second dataset and therefore I used this dataset-argument. However, the argument seems to be ignored since I get the same error message as before.
>
> The same happens when I use the read.flowSet()-function.
> Only the read.FCS() function seems to work.
> What can I do?
>
> read.flowSet(paste0(path_workspace,"A14VFR Export.LMD"), dataset = 2)
>
> Help is appreciated, Silke


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