Hi Steve,

Thanks for the clarification. I guess it's a matter of waiting for the
Cygwin devs to update to R 3.0.1 then.

In the meanwhile, may I ask (Michael?) to also patch the latest version of
IRanges (I am guessing 1.16.6, according to my logs) for R 2.15.1?

Thanks!
Best,


On 15 July 2013 09:17, Steve Lianoglou <lianoglou.steve@gene.com> wrote:

> Hi Enrico,
>
> On Mon, Jul 15, 2013 at 1:10 AM, Enrico Ferrero
> <enricoferrero86@gmail.com> wrote:
> > Hi Michael,
> >
> > I can't seem to install the latest version of IRanges.
> > For some reason, bioLite() still tries to pull an old version of IRanges,
> > (that still contains the bug):
> [snip]
> > I'm currently on R version 2.15.1 and Bioconductor version 2.11, trying
> to
> > upgrade to 2.12.
> > Am I doing something wrong?
>
> Yes you are.
>
> You need to be running R-3.0.x in order to use bioc 2.12, as is
> pointed out in the intro of the Bioconductor installation page:
>
> http://bioconductor.org/install/
>
> HTH,
>
> -steve
>
> --
> Steve Lianoglou
> Computational Biologist
> Bioinformatics and Computational Biology
> Genentech
>



-- 
Enrico Ferrero
PhD Student
Steve Russell Lab - Department of Genetics
FlyChip - Cambridge Systems Biology Centre
University of Cambridge

e.ferrero@gen.cam.ac.uk
http://flypress.gen.cam.ac.uk/

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