http://iti.stanford.edu/tools/cssam.html

perhaps?



On Thu, Jun 20, 2013 at 1:01 AM, January Weiner <january.weiner@gmail.com>wrote:

> Dear all,
>
> is there a package (or data) available for R/Bioconductor that would
> allow me to test for enrichment of cell-type specific genes, in
> specific genes related to function of specific immune cells
> (macrophages, neutrophils etc.)? In essence, I am searching for an
> ontology based on cell-type specific expression that would be amenable
> to a standard enrichment test (for example, showing a low p-value if a
> gene set is enriched in macrophage-specific genes).
>
> Kind regards,
>
> j.
>
> --
> -------- January Weiner --------------------------------------
>
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-- 
*A model is a lie that helps you see the truth.*
*
*
Howard Skipper<http://cancerres.aacrjournals.org/content/31/9/1173.full.pdf>

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