Hi,
I have used DEXSeq for differential exon usage testing. I believe  what
DEXSeq uses as threshold for finding significant differentially expressed
exons is p-adjust < 0.1 and it reports both p-value and p-adjust in its
results.
My question is that what is the difference between p-adjust and p-value?
when I use p-adjjust < 0.1 as threshold, I get a few number of genes, while
in the case of p-value < 0.05, I get ,much more genes. I was wondering
which threshold is more accurate?

Sincerely Yours,
Delasa Aghamirzaie
Genetics, Bioinformatics, and Computational Biology (GBCB) PhD Student
Virginia Tech
Blacksburg, Virginia

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