Hi everyone,

I am analysing some MeDIP-seq data with the MEDIPS package. When
calculating differential coverage, a "ratio" parameter needs to be chosen
in case the "CNV" parameter is set to TRUE (which is my case, as I am
comparing samples relative to different genotypes). Nevertheless, it seems
that this choice is totally arbitrary and I was wondering if someone among
the MEDIPS users might have a hint on how to set the ratio.

Thanks.

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