the latter, although it seems that something like a Lassoed multinomial
logistic regression would do as well...

the CMA package implements all sorts of classification schemes for
microarray data, but I don't think NTP is one.



On Mon, May 13, 2013 at 2:48 PM, Siefker, Ed B. <EdwardSiefker@creighton.edu
> wrote:

> Is there an R module that does NTP?  Hoshida 2010
> refers to R code that is part of GenePattern, but I'd rather
> not deal with the admin headaches of setting up a
> GenePattern server, and I prefer that all my analyses are
> self-contained anyway.
>
> Are there any packages that do this yet?  Should I just
> download GenePattern, find the R code in question,
> and adapt it to my needs? Thanks
> -Ed
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-- 
*A model is a lie that helps you see the truth.*
*
*
Howard Skipper<http://cancerres.aacrjournals.org/content/31/9/1173.full.pdf>

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