Abdul,
   Can you tell more about your project and what exactly you mean
by integrated network analysis.  What are you integrating into your DE
genes?  what organism are you working with?  What are you trying to find in
the data.  Is the data RNA seq or micro array (and which platform).

bioconductor has many packages that you can use to handle networks, but the
`best` package depends on your goals / aims / resources.

Best


On Tue, May 7, 2013 at 5:57 AM, Abdul Rawoof <abdul87.edu@gmail.com> wrote:

> Hello,
>
> I want to do an intergrated network analysis for my Differential Expressed
> genes. So could anyone tell me how can I do. Which package should I use.
>
> Thanks,
> Abdul Rawoof
>
>         [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
>



-- 
Sam McInturf

	[[alternative HTML version deleted]]

