Hi,
Is it normal not to have the same number of sequences in the fastq file and the object generated from readfastq?

grep @ SRR062641.filt.fastq | wc -l
187786

  data <- readFastq("SRR062641.filt.fastq")

summary(data)
    Length      Class       Mode 
    109811 ShortReadQ         S4 

Thanks,

Carol

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