All,

I have been trying to use the function getGEO, part of GEOquery package to retrieve GSE objects. 
However, I am getting the following error message:

data/GEO> gse2553 <- getGEO('GSE2553',GSEMatrix=TRUE)
Found 1 file(s)
GSE2553_series_matrix.txt.gz
Using locally cached version: /var/folders/z4/hzbhqd1j3gzc4mqhq29fqb240000gr/T//Rtmpb3s3hN/GSE2553_series_matrix.txt.gz
Error in `row.names<-.data.frame`(`*tmp*`, value = value) : 
 invalid 'row.names' length

I get the same error no matter which GEO GSE id I use. It seems to be a parsing error, when creating a data frame
This was suppose to work, as this code snippet is from the "Using the GEOquery package" PDF (page 13: http://www.bioconductor.org/packages/2.11/bioc/vignettes/GEOquery/inst/doc/GEOquery.pdf).

Any thoughts about what id the cause of error or how to fix it? 


Thank you very much,


Lucas
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