Thanks for the heads up Michael.  I will look into it.

best,

Mike


On Mon, Mar 25, 2013 at 10:31 PM, Michael Muratet
<mmuratet@hudsonalpha.org>wrote:

>
> On Mar 25, 2013, at 1:36 PM, Simon Anders wrote:
>
> > Hi
> >
> > [Please keep conversations on the list.]
> Sorry, upgraded my OS X and didn't realize there is now a separate button
> for 'reply all'. Progress.
> >
> >> I tried to install deseq2 and discovered I need R 2.16. CRAN only
> >> goes up to 15.3, but they have beta r003, is this what you used?
> >
> > No, I used R 2.15. See the explanations on the Bioc web page on how R
> and Bioc versions are tied together, and how devel packages are handled.
> >
>
> Found the BioC devel version install web page. It said install R.003, so I
> did and now have DESeq2. I notice that the user manual dated yesterday has
> over 10K pages of output starting in section 3. Maybe it was intentional,
> but I thought I would bring it to your attention.
>
> Thanks
>
> Mike
>
> Michael Muratet, Ph.D.
> Senior Scientist
> HudsonAlpha Institute for Biotechnology
> mmuratet@hudsonalpha.org
> (256) 327-0473 (p)
> (256) 327-0966 (f)
>
> Room 4005
> 601 Genome Way
> Huntsville, Alabama 35806
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
>

	[[alternative HTML version deleted]]

