Hello,

does anybody know how to convert nimblegen .pair files into .xys files?

I tried to create a text file like that:


X  Y  SIGNAL  COUNT
1   1   321.12   1
1   2         NA   1
1   3    123.34  1
..  ..     .....


but i get the following error:
"
Checking designs for each XYS file... Done.
Allocating memory... Error in smartReadXYS(filenames, sampleNames) :
   negative extents to matrix

"

thanks in advance

Markus


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