Dear All,

I will now start and anlyze some MeDIP seq data with MEDIPS Bioconductor
Package

I went through reading all the MEDIPS manual,

I have to compare methylation profile of two cell lines, I have the Input
of both of them
,
why in the example refered in the manual there is only one INPUT.SET for
two conditions?

CONTROL.SET, TREAT.SET, and INPUT.SET


Any suggestions?

Thanks,
Paolo

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