On Fri, Jan 11, 2013 at 9:13 AM, Martin Morgan <mtmorgan@fhcrc.org> wrote:

> and Rsamtools::asBam
>

which is an awesomely simple and effective function, since it handles a
bunch of annoying SAM/BAM-related impedimentia by default!

anyone who stumbles on a SAM file at some point will be happy to make its
acquaintance
thank you Herve and Martin for anticipating everyone else's common case :-)


-- 
*A model is a lie that helps you see the truth.*
*
*
Howard Skipper<http://cancerres.aacrjournals.org/content/31/9/1173.full.pdf>

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