I am using a "third-party" SNP microarray using probed qPCR.  My data is
exported in organized csv files by the chip with columns for metadata and
VIC, FAM, and ROX fluorescence on the final cycle.

How can I accommodate my data to the existing SNP clustering algorithms
(ie. crlmm) ?

Please excuse the generality of my question. I'm a "learning member" of the
community.

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