Dear all:
I'm trying to load cuffdiff output with cummeRbund, but I have a problem
with "#" characters present in the output files.

How can avoid this problem?

This is the error message

Creating database /data/projects/LL/comp/test_cdout/cuffData.db
Reading Run Info File /data/projects/LL/comp/test/04_DE/test_cdout/run.info
Writing runInfo Table
Reading Read Group Info  /data/projects/LL/comp/test/04_DE/test_cdout/
read_groups.info
Writing replicates Table
Reading /data/projects/LL/comp/test/04_DE/test_cdout/genes.fpkm_tracking
Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings,
 :
  line 7021 did not have 17 elements


Thanks in advance,
Estefania

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