Hello group,

Does anyone have experience normalizing two-color Agilent data from GSM
files that have been downloaded from GEO using getGEO()?
It seems like it should possible to construct an marray object from the
information in a GSM object, and then use marray normalization functions,
but if there's a simpler way to do the analysis or an existing package that
processes GSM objects directly, I'd greatly appreciate any direction that
anyone could provide!

Thanks,
Alan

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