Hi Everyone,
I am wondering if there is a tool to create transcriptDB object from gff3
file. GenomicFeatures package does not seem to have a method to create it
from GFF. (we work with non model organisms, so no ucsc/biomart available
for us).

I should be able to create it with  'makeTranscriptDb(transcripts,
splicings, genes=NULL, chrominfo=NULL, metadata=NULL, ...)', but wondering
if there is any tool that already does this?

Thanks verymuch in advance,
Gowthaman


-- 
Gowthaman

Bioinformatics Systems Programmer.
SBRI, 307 West lake Ave N Suite 500
Seattle, WA. 98109-5219
Phone : LAB 206-256-7188 (direct).

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