On Mon, Jul 23, 2012 at 7:58 AM, Barbara Uszczynska <uszczynska@gmail.com>wrote:

> Dear Conductors,
>
> Is it better to use Pearson's or Spearman's correlation coefficient to
> measure the reproducibility among microarray biological replicates?
>
> I would be grateful for any hint.
>
>
Typically, after normalization, they will be nearly the same since the
effect of normalization is often to make the distributions of the arrays
similar.

Sean

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