yeah, the gene expression Atlas seems to have it all.

Thanks Sean a lot

On Tue, Jun 12, 2012 at 12:57 PM, Sean Davis <sdavis2@mail.nih.gov> wrote:

> On Tue, Jun 12, 2012 at 5:46 AM, Alyaa Mahmoud <alyamahmoud@gmail.com>
> wrote:
> > Hi All
> >
> > I would highly appreciate if you anyone would direct me to some resource
> > for already analysed gene expression data for different human conditions,
> > e.g. cancer, diseases ..etc. i just need to collect expression status of
> as
> > many genes as possible in different conditions.
> >
> > I know of GEO ofcourse but its mostly .CEL files and I need
> ready-processed
> > and analysed data.
>
> Actually, the RAW data in GEO can include .CEL files, but the data in
> GEO (available via the website or via the GEOquery package) are
> processed but do not include analysis in terms of groups.
>
> You may want to look at the gene expression atlas:
>
> http://www.ebi.ac.uk/gxa/
>



-- 
Alyaa Mahmoud

"Love all, trust a few, do wrong to none"- Shakespeare

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