Hello all,

does anyone  knows how we can overlay expression data { coloring with up
and down genes } in pathways using R package or any other script.

Especially the results from SPIA package , we get the  kegg link like this
...

http://www.genome.jp/dbget-bin/show_pathway?hsa05200+999+22798+3915+3673+3675+6776+4233+2260+2263+7039+3082+5899+5337+5579+112399+2034+9063+1029+355+650+5743+596+7188+1612+2113+4254


Now I would like to color up and down regulated genes according to
differentially expressed genes from limma package results.


Thanks in advance.

Kind Regards
-Amit Kumar

	[[alternative HTML version deleted]]

