Dear the edgeR community,

Good day.

1.  Could someone please light me,  does the "topTags"  show also the
down-regulated genes/tags in the top genes list? If it is not, how could I
get
     the down-regulated genes/tags list?

2.  Using this command:  summary(de <- decideTestsDGE(lrt))
     is able to tell the total number of up-regulated and down-regulated
genes/tags of the test. I would like to learn how can I extract these up and
     down-regulated genes/tags list or I should look at the "topTags"
command instead?

Thank you very much for your time and help.

Best regards,
KJ Lim

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