Dear All,

The data set has 3 controls, and 9 treatments (transgenic biological
replicates with different levels of gene expression), we use DESeq
(multi-factor design) to normalize the raw data for math. modeling. How to
use the output from DESeq to convert the raw read counts (integers) to
normalized data (decimals) ??

What do you think the data normalized using DESeq is good for math.
modeling ?

Thanks

Xin Davis
NCSU

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