Dear list,

I need to find some sequence patterns in C.pombe genome.

I thought to use for it  BSGenome and matchPattern function, however S.pombe is not available in BSgenome.

Is it possible to install C.pombe genome from another source (not USCS) and still use it with BSgenome?

If not, what are other options?

Thank you!

Best,

Boris



Dr. Boris Zybaylov
Instructor
Department of Biochemistry and Molecular Biology
University of Arkansas Medical Sciences
Little Rock, AR
1-501-686-7254
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