Hello Syed,
Thanks for the suggestion.
Regards,
mlsc

On Mon, Apr 2, 2012 at 3:54 PM, Syed Haider <syed.haider@oicr.on.ca> wrote:

> Dear MLSC,
>
> From the path it looks you are trying to use biomaRt to communicate to
> biomart v0.8 (release candidate 6). I believe biomaRt package does not
> support the new webservice API of biomart v0.8. It should work if your
> biomart installation was v0.7.
>
> Best,
> Syed
>
>
>
> On 02/04/2012 13:30, MLSC wrote:
>
>> Hello friends,
>> I was trying to set up local BioMart. BioMart web service is installed
>> properly. But when I connect through biomaRt using listMart(), i get
>> following error.
>>
>>  listMarts(host="http://10.3.2.**36 <http://10.3.2.36>",port=9000,
>>>
>> path="/home/mlsc/BioMart/**release-0_8-candidate_6/")
>> Request to BioMart web service failed. Verify if you are still connected
>> to
>> the internet.  Alternatively the BioMart web service is temporarily down.
>> Check http://www.biomart.org and verify if this website is available.
>> Error: XML content does not seem to be XML, nor to identify a file name
>>
>> Can somebody suggest me, how to get out of this error?
>>
>> Regards,
>> mlsc
>>
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