Hello

I am tryng to install GenomeRanges in R, svn last version, but the required version of IRanges is not available (1.13.23). Details are below.

Thank you in advance


> biocLite("GenomicRanges")
BioC_mirror: http://bioconductor.org
Using R version 2.15, BiocInstaller version 1.3.7.
Installing package(s) 'GenomicRanges'
Installing package(s) into '/stockage/lib64/Rdev'
(as 'lib' is unspecified)
Warning: dependency 'IRanges (>= 1.13.23)' is not available
trying URL 'http://bioconductor.org/packages/2.10/bioc/src/contrib/GenomicRanges_1.7.24.tar.gz'
(...)
** preparing package for lazy loading
Error : package 'IRanges' 1.13.22 was found, but >= 1.13.23 is required by 'GenomicRanges'
ERROR: lazy loading failed for package 'GenomicRanges'
* removing '/stockage/lib64/Rdev/GenomicRanges'

> biocLite("IRanges")
BioC_mirror: http://bioconductor.org
Using R version 2.15, BiocInstaller version 1.3.7.
Installing package(s) 'IRanges'
Installing package(s) into '/stockage/lib64/Rdev'
(as 'lib' is unspecified)
trying URL 'http://bioconductor.org/packages/2.10/bioc/src/contrib/IRanges_1.13.22.tar.gz'
Content type 'application/x-gzip' length 673858 bytes (658 Kb)
opened URL
==================================================
downloaded 658 Kb

* installing *source* package 'IRanges' ...
(...)
** help
*** installing help indices
** building package indices
** installing vignettes
   'IRangesOverview.Rnw'
   'RleTricks.Rnw'
** testing if installed package can be loaded

* DONE (IRanges)

Johanne Duhaime

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