lumIDAT() will put the IDAT files into a MethyLumiM object

as(mlumi, 'MethyLumiM') will coerce an existing MethyLumiSet into a
MethyLumiM object

hope this helps,

--t



On Wed, Jan 18, 2012 at 11:43 AM, wei wang <biowendy@gmail.com> wrote:

> Dear Geoff,
>
> When you open your "**FinalReport.txt" file using any text editor, do you
> see [Header] in the first line, and [Sample Methylation Profile] in about
> the 8th line?  Also check if there are extra blanks at the end of the first
> several lines.  Sometimes the extra blanks will mess up the reading.
>
> To convert MethyLumiSet to MethyLumi, you can try this:
> new_MethyLumi_data <- as(old_MethyLumiSet_data, "MethyLumi")
>
> Wei
>
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>
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-- 
If people do not believe that mathematics is simple,
it is only because they do not realize how complicated life is. John von
Neumann<http://www-groups.dcs.st-and.ac.uk/~history/Biographies/Von_Neumann.html>

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