I am using DESeq for RNAseq data. I am interested in comparing the
distribution of my samples individually with that of the model used by
DESeq for all of my data, hoping to rationalise exclusion of several
samples by this method. Where can I find the estimated mean, variance
for the model fitted to my data within the output? I assume it is
created after the nbinomtest function but have dissected the output
without success. I hope someone can point me in the right direction.

 

Kind regards,

 

Bruce.

 

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