Hi,

I wanted to determine the locations for all the alternative splicing sites. I've made the query in biomaRt, but am not sure if this is giving me what I want. Any help would be appreciated!

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library(biomaRt)
ensembl = useMart("ensembl", dataset = "hsapiens_gene_ensembl")
atb2 <- c("dbass5_id","dbass5_name",'hgnc_symbol','chromosome_name','start_position','end_position','strand')
splice.locs <- getBM(attributes=atb2, mart=ensembl) 
print(splice.locs[1:5,])

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thanks!

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