Hi,
Ya thats correct..I have summed up the
 reads using viewSums but I want to get the gene information .Hi,
I found this archive from bioconductor-sig-sequencing mailing list where they have discussed about cov_by_gene <- Views(cov, genes)
viewSums(cov_by_gene)https://stat.ethz.ch/pipermail/bioc-sig-sequencing/attachments/20110723/b9f2c69c/attachment.pl
But I am not sure what is the object "genes" that has been used along with the coverage.Thats exactly what I would like to do.

Thanks,Rohan
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