Dear All members,

I am analyzing a mouse microarray data by using SPIA package. At the end, I need to input an organism name so the package can recognize it.

res=spia(de=HIF1a,all=HIF1a1,organism="hsa",nB=2000,plots=F,beta=NULL,combine="fisher",verbose=F)

“hsa” represent human sample. I am not sure what should I input in for mouse sample.
There is a table listed on this website: http://bioinformaticsprb.med.wayne.edu/SPIA

I don’t understand these abbreviation. Can somebody help me on this?

Many Thanks

Jing

Oregon


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