







Hello, I have a question to plot a normalized result, look what I've done is the following:


library(marray)
library("hgug4112a.db")
library(annotate)
my.filenames <- c( "1.txt",
                   "2.txt",
                   "3.txt",
                   "4.txt")

one.col<-list(    R="gMeanSignal",G="gProcessedSignal",
           Rb="gBGMedianSignal",Gb="gProcessedBackground")
RG <- read.maimages(my.filenames, source="agilent", columns=one.col, dec=".")

 RG <- backgroundCorrect(RG, method="half", offset=50)
 MA <- normalizeBetweenArrays(RG,method="quantile")


but I want to plot the normalized results with boxplot, but I don't that argument will be passed to the function boxplot
.

 Thanks


 		 	   		   		 	   		   		 	   		  
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