



Hi,
I have a question about filterMicroRna in AgiMicroRna package function for filtering probes in Agilent microRNA dataset.

>ddPROC
= filterMicroRna(ddNORM.micro, dd, control = TRUE, IsGeneDetected =
TRUE, wellaboveNEG = FALSE, limIsGeneDetected = 75, limNEG = 25,
makePLOT = TRUE, target.micro, verbose = TRUE)

If
in a dataset there are two or more sample replicates and in the step of
filtering probes I want to exclude a probe only if gIsGeneDetected = 0
in all two or three sample replicates. 

I don't think by 'filterMicroRna' function provides any option for this type of filtering. 

Are there any suggestions ? 

Thanks
Vickie S 		 	   		  
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