Thanks for the link Shirley this is exactly what I am looking for. However, I need something that I can download to my local CPU. On Fri, Jul 8, 2011 at 7:10 AM, shirley zhang wrote: > Dear TIA, > > SNAP web server might serve your purpose. SNAP allows either SNPid or > Genomic Locus as inputs. > http://www.broadinstitute.org/mpg/snap/ldsearchpw.php > > Best, > Shirley > > On Fri, Jul 8, 2011 at 9:23 AM, rna seq wrote: > >> Hello, >> >> I am trying to determine the linkage association between a set of ~200 >> coordinates all within about 1Mb of eachother. I would like to create a >> function that I can enter two locations and have the R^2 value of the >> linkage association between these two locations returned. I am wondering >> if >> anyone can suggest an efficient scheme to accomplish this. >> >> TIA >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor@r-project.org >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: >> http://news.gmane.org/gmane.science.biology.informatics.conductor >> > > > > [[alternative HTML version deleted]]