Dear TIA,

SNAP web server might serve your purpose. SNAP allows either SNPid or
Genomic Locus as inputs.
http://www.broadinstitute.org/mpg/snap/ldsearchpw.php

Best,
Shirley

On Fri, Jul 8, 2011 at 9:23 AM, rna seq <rna.seeker@gmail.com> wrote:

> Hello,
>
> I am trying to determine the linkage association between a set of ~200
> coordinates all within about 1Mb of eachother. I would like to create a
> function that I can enter two locations and have the R^2 value of the
> linkage association between these two locations returned. I am wondering if
> anyone can suggest an efficient scheme to accomplish this.
>
> TIA
>
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>
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