Hello,

It used to work half a year ago, but now I get an error message:

> summary<-aggregate(simple.rle.list, IRanges.list, FUN=sum)
Error in .local(x, ...) : for Ranges 'by', 'length(x) != length(by)'

Basically, I want to sample the Rle vector at specific ranges and get sum of the values over the indicated ranges.

Thank you for help,
Skirmantas K.

Platform: x86_64-pc-linux-gnu (64-bit)

locale:
[1] LC_CTYPE=en_GB.UTF-8       LC_NUMERIC=C
[3] LC_TIME=en_GB.UTF-8        LC_COLLATE=en_GB.UTF-8
[5] LC_MONETARY=C              LC_MESSAGES=en_GB.UTF-8
[7] LC_PAPER=en_GB.UTF-8       LC_NAME=C
[9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] rtracklayer_1.12.0                 RCurl_1.5-0
[3] bitops_1.0-4.1                     BSgenome.Mmusculus.UCSC.mm9_1.3.17
[5] biomaRt_2.8.0                      chipseq_1.2.0
[7] ShortRead_1.10.0                   Rsamtools_1.4.0
[9] lattice_0.19-26                    BSgenome_1.20.0
[11] Biostrings_2.20.0                  GenomicRanges_1.4.1
[13] IRanges_1.10.0

loaded via a namespace (and not attached):
[1] Biobase_2.12.1 grid_2.13.0    hwriter_1.3    tools_2.13.0   XML_3.2-0

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