Hi;

 

I have a list of transcripts with tag counts for each of them in 8 different
tissues. My list includes many isoforms of similar genes etc. which is not a
problem for me - but will it effect the stats from edger as obviously some
tags are counted multiple times. There are 40M tags in each experiment so I
am assuming the aggregate effect should prevent any great problems.

 

My main questions are;

1.       I would like to identify which transcripts appear to be specific to
an individual tissue from my 8

2.       Which genes are ubiquitously expressed across all 8

 

Cheers

Dennis


	[[alternative HTML version deleted]]

