Hi, Sean

I have one more question.
Could you explain what the multiple sequences labeled as 'upstream1000,
upstream2000, upstream5000' in the galGla3 assembly?
Thanks.



2011/5/4 Sean MacEachern <sean.maceach@gmail.com>

> Hi Namyoung,
>
> unfortunately the Chicken genome is not as complete as many of the
> other mammalian genomes. There is a new release that is due to come
> out later this year, but that most likely will still be missing many
> of the micro chromosomes. There is hope that when single molecule
> sequencing is reliably running that this may improve things.
>
> Sean
>
> On Tue, May 3, 2011 at 1:26 PM, Namyoung Jung <jnamyoung@gmail.com> wrote:
> > Hi,
> > I'm a graduate student at Hopkns and working with chicken BSgenome
> > Has anyone noticed there are some missing chromosome like 21-28 in the
> > package?
> > If anyone can explian this , it'll be helpful for my project.
> > Thanks.
> >
> > All the best,
> > --
> > Namyoung Jung
> > PhD candidate, Department of Cellular and Molecular Medicine
> > Johns Hopkins School of Medicine, Baltimore, MD, 21205
> > njung1@jhmi.edu
> >
> >        [[alternative HTML version deleted]]
> >
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> > Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
> >
>



-- 
Namyoung Jung
PhD candidate, Department of Cellular and Molecular Medicine
Johns Hopkins School of Medicine, Baltimore, MD, 21205
njung1@jhmi.edu

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