Hello,



I am very new to R programming. I am trying to read the data from Genome
Studio output using Limma package. I am able to do so by:



>x <- read.ilmn(files="path.for.probe", other.columns="Detection")



>x$other gives me the detection p values for all the samples for the
respective genes



While x$genes gives me the gene name and symbol



I wanted to select all the genes with p values less than 0.1 (even if the p
value of one sample for that particular gene is less than 0.1).



Can you help me with this?



Thanks,

Rahul Maurya

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