what are the contents of 'ndf' and 'xys'?

On 29 April 2011 09:15, Michael MOZAR <mozemaster@gmail.com> wrote:

> when i try to make a package i have an error like this :
>
> Erreur dans validObject(.Object) :
>  objet de classe "ScalarCharacter" incorrect : ScalarCharacter must have
> length one
>
>
>  here my script:
>
> library(pdInfoBuilder)
>
> ndf <- list.files(pattern = ".ndf", full.names = TRUE)
> xys <- list.files(pattern = ".xys", full.names = TRUE)
> seed <- new("NgsExpressionPDInfoPkgSeed",
> ndfFile = ndf, xysFile = xys,
> author = "MOZAR Michael",
> email = "michael.mozar@univ-perp.fr",
> biocViews = "AnnotationData",
> genomebuild = "Retroryza",
> organism = "Rice", species = "Oryza Sativa",
> url = "none")
>
> here my sessionInfo :
>
> library(pdInfoBuilder)
>
> ndf <- list.files(pattern = ".ndf", full.names = TRUE)
> xys <- list.files(pattern = ".xys", full.names = TRUE)
> seed <- new("NgsExpressionPDInfoPkgSeed",
> ndfFile = ndf, xysFile = xys,
> author = "MOZAR Michael",
> email = "michael.mozar@univ-perp.fr",
> biocViews = "AnnotationData",
> genomebuild = "Retroryza",
> organism = "Rice", species = "Oryza Sativa",
> url = "none")
>
> and my traceback() :
>
> ndf <- list.files(pattern = ".ndf", full.names = TRUE)
> xys <- list.files(pattern = ".xys", full.names = TRUE)
> seed <- new("NgsExpressionPDInfoPkgSeed",
> ndfFile = ndf, xysFile = xys,
> author = "MOZAR Michael",
> email = "michael.mozar@univ-perp.fr",
> biocViews = "AnnotationData",
> genomebuild = "Retroryza",
> organism = "Rice", species = "Oryza Sativa",
> url = "none")
>
> thanks for your help
> --
> MOZAR Michaël
> Master Bioinformatique
> Université de Nantes
> 0688715937
>
>        [[alternative HTML version deleted]]
>
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor@r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives:
> http://news.gmane.org/gmane.science.biology.informatics.conductor
>



-- 
Successful people ask better questions, and as a result, they get better
answers. (Tony Robbins)

	[[alternative HTML version deleted]]

