Hi,

That's great, thank you!

On Tue, Apr 26, 2011 at 3:26 PM, Steve Lianoglou <
mailinglist.honeypot@gmail.com> wrote:

> Hi,
>
> On Tue, Apr 26, 2011 at 9:17 AM, João Moura <palerma@gmail.com> wrote:
> > Thank you Sean and Paul,
> >
> > Actually I was looking for something to using in R without calling
> samtools.
>
> To convert sam -> bam without leaving the comfort of your aRm chair, try:
>
> R> library(Rsamtools)
> R> ?asBam
>
> Scan the docs to see how asBam works.
>
> I'm not sure when that was added. If you don't see it in your install,
> maybe you need to be running R-2.13 and bioc 2.8
>
> -steve
>
> --
> Steve Lianoglou
> Graduate Student: Computational Systems Biology
>  | Memorial Sloan-Kettering Cancer Center
>  | Weill Medical College of Cornell University
> Contact Info: http://cbio.mskcc.org/~lianos/contact
>



-- 
João Moura

	[[alternative HTML version deleted]]

